Myokit  ::  API and User Guide

  • Introduction
  • User guide
  • mmt File syntax
  • API :: Core
  • API :: Simulations
  • API :: Library
    • Common experiments
    • Common Plots
    • Dependency analysis
    • Hodgkin-Huxley current models
    • Markov Models
    • Multi-model functions
    • Parameter identification
  • API :: Formats
  • API :: Graphical User Interfaces
  • API :: Index
  • Command line tools

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API :: LibraryΒΆ

The module myokit.lib provides access to a bundle of tools outside the scope of the Myokit core. The lib module is subdivided in a number of submodules detailed in the sections listed below.

  • Common experiments
    • Step protocol experiments
    • Others
    • Base classes
  • Common Plots
  • Dependency analysis
  • Hodgkin-Huxley current models
    • Analytical simulation
    • Finding and manipulating HH-states
  • Markov Models
    • Deprecated
  • Multi-model functions
  • Parameter identification
    • Global optimization
    • Local optimization
    • Parameter space exploration
    • Loss surface visualisation (2d)
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